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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CHOL rs2009105 chr15:91457810 T/G 7.36E-5 20 31.42 0 21.67 KM Plot
CHOL rs35599671 chr18:32887277 CT/C 2.21E-5 19 29.77 0 0 KM Plot
CHOL rs3812187 chr6:4136128 C/T 1.31E-5 20 26.93 0 0 KM Plot
CHOL rs4597487 chr2:176249836 C/T 2.21E-5 19 31.42 0 0 KM Plot
CHOL rs4692473 chr4:30633835 C/A 0.000101 19 23.63 38.43 0 KM Plot
CHOL rs4932180 chr15:91459981 G/A 7.36E-5 20 31.42 0 21.67 KM Plot
CHOL rs4932377 chr15:91459925 G/A 7.36E-5 20 31.42 0 21.67 KM Plot
CHOL rs56189238 chr13:24485712 A/T 2.21E-5 19 25.28 0 0 KM Plot
CHOL rs57648122 chr2:176261224 G/T 1.31E-5 20 26.93 0 0 KM Plot
CHOL rs5873911 chr6:4137432 A/AC 1.31E-5 20 26.93 0 0 KM Plot
CHOL rs60064657 chr2:113371637 C/A 0.000121 19 35.9 0 21.67 KM Plot
CHOL rs6758959 chr2:176248431 T/C 1.31E-5 20 26.93 0 0 KM Plot
CHOL rs72630484 chr15:91458406 C/G 7.36E-5 20 31.42 0 21.67 KM Plot
CHOL rs72632010 chr4:63653806 G/A 2.21E-5 19 25.28 0 0 KM Plot
CHOL rs72632011 chr4:63653825 G/C 2.21E-5 19 25.28 0 0 KM Plot